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<p><font size="2" face="sans-serif">Dear Adam, </font><font size="2" face="Consolas">Hiroshi</font><font size="2" face="sans-serif">, List</font><br>
<br>
<font size="2" face="sans-serif">Watching the same since this morning #-) ...they changed to https this weekend. </font><br>
<br>
<font size="2" face="sans-serif">wget'ing https works fine, but we canot simply change the protocol in our script, because it seems LibXML can't handle it. So what about getting the https from out of the script and change parse_url into parse_file on that local file. Or change to </font><font size="3" face="serif">LWP::Protocol::https</font><font size="2" face="sans-serif">?</font><br>
<br>
<font size="2" face="sans-serif">Jens</font><br>
<br>
<br>
<font size="2" face="sans-serif">-- <br>
Jens Vieler<br>
Zentrale Informatik<br>
Universität Zürich<br>
Stampfenbachstrasse 73<br>
CH-8006 Zürich<br>
<br>
mail: jens.vieler@id.uzh.ch<br>
phone: +41 44 63 56777<br>
<a href="http://www.id.uzh.ch">http://www.id.uzh.ch</a></font><br>
<br>
<img width="16" height="16" src="cid:1__=4EBB0AF7DFA9932E8f9e8a93df9@lotus.uzh.ch" border="0" alt="Inactive hide details for Adam Field ---07.11.2016 11:30:30---Visiting the URL, I get: <eFetchResult>"><font size="2" color="#424282" face="sans-serif">Adam Field ---07.11.2016 11:30:30---Visiting the URL, I get: <eFetchResult></font><br>
<br>
<font size="1" color="#5F5F5F" face="sans-serif">Von: </font><font size="1" face="sans-serif">Adam Field <Adam.Field@jisc.ac.uk></font><br>
<font size="1" color="#5F5F5F" face="sans-serif">An: </font><font size="1" face="sans-serif">"eprints-tech@ecs.soton.ac.uk" <eprints-tech@ecs.soton.ac.uk></font><br>
<font size="1" color="#5F5F5F" face="sans-serif">Datum: </font><font size="1" face="sans-serif">07.11.2016 11:30</font><br>
<font size="1" color="#5F5F5F" face="sans-serif">Betreff: </font><font size="1" face="sans-serif">Re: [EP-tech] fail to import PubMedID</font><br>
<font size="1" color="#5F5F5F" face="sans-serif">Gesendet von: </font><font size="1" face="sans-serif">eprints-tech-bounces@ecs.soton.ac.uk</font><br>
<hr width="100%" size="2" align="left" noshade style="color:#8091A5; "><br>
<br>
<br>
<font size="2" face="Calibri">Visiting the URL, I get:</font><br>
<font size="2" face="Calibri"> </font><br>
<font size="2" face="Calibri"><eFetchResult></font><br>
<font size="2" face="Calibri"><ERROR>WebEnv parameter is required</ERROR></font><br>
<font size="2" face="Calibri"></eFetchResult></font><br>
<font size="2" face="Calibri"> </font><br>
<font size="2" face="Calibri">If I add a dummy WebEnb parameter, I get:</font><br>
<font size="2" face="Calibri"> </font><br>
<font size="2" face="Calibri"><eFetchResult></font><br>
<font size="2" face="Calibri"><ERROR>query_key parameter is required</ERROR></font><br>
<font size="2" face="Calibri"></eFetchResult></font><br>
<font size="2" face="Calibri"> </font><br>
<font size="2" face="Calibri">…it looks like the API the plugin is using has changed </font><font size="2" face="Wingdings">L</font><font size="2" face="Calibri"> It’s unlikely to be a local problem.</font><br>
<font size="2" face="Calibri"> </font><br>
<font size="2" face="Times New Roman"> </font>
<p>
<table class="MsoNormalTable" border="1">
<tr valign="top"><td width="235"><a href="http://www.jisc.ac.uk/"><img src="cid:2__=4EBB0AF7DFA9932E8f9e8a93df9@lotus.uzh.ch" width="60" height="35" align="bottom" border="0"></a></td></tr>
<tr valign="top"><td width="235"><font size="3" color="#2C3841" face="Corbel"><b>Adam Field</b></font><font size="3" color="#2C3841" face="Corbel"><br>
SHERPA services analyst developer</font></td></tr>
</table>
<font size="2" face="Calibri"> </font><br>
<font size="2" face="Calibri"> </font><br>
<font size="3" face="Calibri"><b>From: </b></font><font size="3" face="Calibri"><eprints-tech-bounces@ecs.soton.ac.uk> on behalf of Hiroshi Watabe <hwatabe@m.tohoku.ac.jp></font><font size="3" face="Calibri"><b><br>
Organization: </b></font><font size="3" face="Calibri">CYRIC</font><font size="3" face="Calibri"><b><br>
Reply-To: </b></font><font size="3" face="Calibri">"eprints-tech@ecs.soton.ac.uk" <eprints-tech@ecs.soton.ac.uk></font><font size="3" face="Calibri"><b><br>
Date: </b></font><font size="3" face="Calibri">Monday, 7 November 2016 01:27</font><font size="3" face="Calibri"><b><br>
To: </b></font><font size="3" face="Calibri">"eprints-tech@ecs.soton.ac.uk" <eprints-tech@ecs.soton.ac.uk></font><font size="3" face="Calibri"><b><br>
Subject: </b></font><font size="3" face="Calibri">[EP-tech] fail to import PubMedID</font><br>
<font size="3" face="Times New Roman"> </font><br>
<font size="2" face="Consolas">Dear all,</font><br>
<font size="2" face="Consolas"> </font><br>
<font size="2" face="Consolas">It seems PubMed only accepts https now and I cannot import PubMed ID</font><br>
<font size="2" face="Consolas">anymore. I got the following warning message.</font><br>
<font size="2" face="Consolas">Unhandled warning in Import::PubMedID: http error : Unknown IO error </font><br>
<font size="2" face="Consolas"> </font><br>
<font size="2" face="Consolas">I modified PubMedID.pm as follows but no success.</font><br>
<font size="2" face="Consolas">27c27</font><br>
<font size="2" face="Consolas">< $self->{EFETCH_URL} =</font><br>
<font size="2" face="Consolas">'</font><a href="http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&retmode=xml&rettype=full"><font size="2" color="#0000FF" face="Consolas"><u>http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&retmode=xml&rettype=full</u></font></a><font size="2" face="Consolas">';</font><br>
<font size="2" face="Consolas">---</font>
<ul style="padding-left: 3pt"><font size="2" face="Consolas"> $self->{EFETCH_URL} =</font><br>
<font size="2" face="Consolas">'</font><a href="https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&retmode=xml&rettype=full"><font size="2" color="#0000FF" face="Consolas"><u>https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&retmode=xml&rettype=full</u></font></a><font size="2" face="Consolas">'; </font></ul>
<font size="2" face="Consolas"> </font><br>
<font size="2" face="Consolas">Error message is as follows;</font><br>
<font size="2" face="Consolas">Unhandled exception in Import::PubMedID: Could not create file parser</font><br>
<font size="2" face="Consolas">context for file </font><br>
<font size="2" face="Consolas"> </font><br>
<font size="2" face="Consolas">Could you help me?</font><br>
<font size="2" face="Consolas"> </font><br>
<font size="2" face="Consolas">Hiroshi</font><br>
<font size="2" face="Consolas">*** Options: </font><a href="http://mailman.ecs.soton.ac.uk/mailman/listinfo/eprints-tech"><font size="2" color="#0000FF" face="Consolas"><u>http://mailman.ecs.soton.ac.uk/mailman/listinfo/eprints-tech</u></font></a><br>
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